rs2396188 chr19:7199523 A>G

Sequence
gtgatccttccgcttcagcctccc[A/G]aggagctaggactacaggagagtg
ASB for transcription factors
GLIS1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GLIS1_HUMAN 2.58 -1.59 0.031.00 2.00 0.78 Weak Discordant
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Motif analysis

GLIS1_HUMAN Weak Discordant
GLIS1_HUMAN pic

Genetic associations

GTEx eQTL Artery_Aorta,  Artery_Tibial

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