rs239982 chr1:201739670 G>A
- Sequence
gcccaggtggaggtcgagccccca[G/A]ccccgtcggcacctccaggcttcc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MDA-MB-453 (breast adenocarcinoma)
- ASB for transcription factors
- ZFX_HUMAN ZN444_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFX_HUMAN | -1.66 | 1.85 | 1.50 | n/a | No Hit | |||
| ZN444_HUMAN | n/a | 3.22 | 2.00 | 0.69 | Weak Concordant |
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Motif analysis
