rs2400749 chr14:99570681 C>T

Sequence
tatcctacagtccagggggtcttc[C/T]cggcaccagattctccttatctag
ASB in cell types
LNCaP C4-2 (prostate carcinoma)
ASB for transcription factors
BRD4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD4_HUMAN 2.15 -0.30 9.1·10-41.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI alzheimers disease (survival time)
GRASP aortic valve calcium,  fasting blood glucose,  ldl cholesterol,  primary rhegmatogenous retinal detachment,  triglycerides change with statins
GTEx eQTL Heart_Left_Ventricle,  Thyroid

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