rs2403015 chr14:101961223 A>G

Sequence
gcaggctggggaggtgggtcccct[A/G]caagcagaagaaaattccatgcga
ASB in cell types
neutrophils from periferal blood MCF7 (Invasive ductal breast carcinoma) HeLa (cervical adenocarcinoma)
ASB for transcription factors
PKNX1_HUMAN RAD21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN -2.09 2.49 1.003.0·10-3 1.00 n/a No Hit
RAD21_HUMAN 0.34 1.91 0.750.04 1.73 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol
GTEx eQTL Artery_Aorta,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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