rs2403330 chr11:10459216 G>A
- Sequence
gctccctcccactcctctcatcag[G/A]gagtggcaggtccttgggtctcag
- ASB in cell types
- K562 (myelogenous leukemia) MDM(monocyte derived macrophages)
- ASB for transcription factors
- TF65_HUMAN MEIS2_HUMAN MTG16_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 2.83 | n/a | 2.50 | n/a | No Hit | |||
| MEIS2_HUMAN | 2.13 | n/a | 2.00 | n/a | No Hit | |||
| MTG16_HUMAN | 2.48 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellum, Brain_Hippocampus, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Ovary, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach