rs2403612 chr11:12280968 G>C
- Sequence
agtctgactatggtggcagcgagg[G/C]ctcccacacagaaccctgtgaaga
- ASB in cell types
- BJ1-hTERT (Human fibroblast telomerase immortalized cell line)
- ASB for transcription factors
- EGR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR1_HUMAN | -0.18 | 1.70 | 1.00 | 2.05 | Concordant |
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Motif analysis
