rs2404006 chr8:133582309 A>T

Sequence
ttttgtttttgttttgttttaaac[A/T]cgcatgtggtatctggagaggtag
ASB in cell types
foreskin keratinocyte
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.58 1.03 0.823.8·10-4 1.42 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  mitral annular calcium,  obesity with early age of onset (age >2)
GTEx eQTL Artery_Aorta,  Cells_Cultured_fibroblasts

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