rs2406370 chr5:52922503 A>G

Sequence
gtagctcctatgttgacacagcca[A/G]gtgtgatgttgccatcactccagc
ASB in cell types
PC3(bone mets prostate adenocarcinoma) HS-ES-2M (Epithelioid sarcoma) SK-N-SH (neuroblastoma)
ASB for transcription factors
PBX4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PBX4_HUMAN n/a 3.74 1.004.1·10-3 3.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum,  homa-b,  hypertension (early onset hypertension),  obesity with early age of onset (age >2),  variant creutzfeldt-jakob disease
GTEx eQTL Artery_Tibial,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Heart_Atrial_Appendage,  Thyroid,  Whole_Blood

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