rs2408361 chr5:56492528 C>T
- Sequence
tgttgttgccatagtgatggtaaa[C/T]ttacatggcatgctggtgggctgt
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- RFX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFX1_HUMAN | -4.33 | 2.16 | 2.50 | -0.36 | Weak Discordant |
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Motif analysis
