rs2408469 chr12:46125366 C>A
- Sequence
gagagaagagagagcgagagagag[C/A]gagcgagagagcgagagagcgaga
- ASB in cell types
- MS-1 (Small cell lung carcinoma) GM18526 (B – cells Lymphoblastoid Cell Lines) liver thyroid gland
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.16 | 0.59 | 1.20 | n/a | No Hit | |||
| RAD21_HUMAN | 1.96 | 0.29 | 1.38 | n/a | n/a | |||
| STAG1_HUMAN | 0.92 | -0.49 | 1.11 | n/a | n/a |
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