rs2410606 chr8:19249667 C>G

Sequence
tttccaatgatgggtgatattaag[C/G]tatgtgtatatatagatagcaatg
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
ATF2_HUMAN ATF7_HUMAN CREB1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF2_HUMAN -2.21 2.21 1.005.2·10-7 1.00 n/a No Hit
ATF7_HUMAN -2.34 2.61 1.001.7·10-6 1.00 n/a No Hit
CREB1_HUMAN -3.29 2.17 1.002.8·10-3 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  ldl cholesterol

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