rs2411377 chr17:48870856 G>A

Sequence
tgggaaggctgaaagccaagcaag[G/A]aaatagtttcagaaaatgagttca
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma) -4.65 2.55 1.000.04 2.00
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Motif analysis

No data available

Genetic associations

GRASP asthma,  irritible bowel syndrome,  late onset alzheimers disease,  parkinsons disease,  stabilized warfarin dose
GTEx eQTL Adipose_Subcutaneous,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Lung,  Nerve_Tibial,  Pancreas,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Testis

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