rs2414032 chr15:50166464 G>A
- Sequence
atatcttaacaaagcaggaaataa[G/A]ctcctgtagagggaaactgccaac
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) HUVEC-C (HUVEC, umbilical vein endothelial cells) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- SMCA4_HUMAN SPI1_HUMAN TF65_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCA4_HUMAN | 1.53 | -0.23 | 1.33 | n/a | n/a | |||
| SPI1_HUMAN | 1.47 | -0.31 | 1.00 | n/a | No Hit | |||
| TF65_HUMAN | -1.25 | 2.23 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Tibial, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Testis, Thyroid