rs2414277 chr15:53978596 C>T

Sequence
gggagaaagagatgagaaatgagc[C/T]gcggaaggtatttggcaatgagaa
ASB in cell types
neural cell
ASB for transcription factors
SMC3_HUMAN RAD21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMC3_HUMAN -2.67 2.91 1.001.8·10-3 1.00 n/a n/a
RAD21_HUMAN -1.66 2.04 1.000.02 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  birth weight,  hdl cholesterol,  personality disorders (pd) - cluster c,  tardive dyskinesia
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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