rs2415078 chr15:70143204 G>A
- Sequence
aacagatgagtgcctgcctagggc[G/A]tgattcaagggggaagaggtcacc
- ASB in cell types
- HEK293 (embryonic kidney) BEAS-2B (bronchial epithelium) CD14+ monocytes
- ASB for transcription factors
- GCR_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -0.15 | 1.32 | 1.50 | n/a | No Hit | |||
| STAT1_HUMAN | 2.03 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP autism, college completion, hdl cholesterol, ldl cholesterol, sporadic creutzfeldt-jakob disease, years of education