rs2417563 chr9:104747390 A>G
- Sequence
atacaaagcactgcacatgcacgc[A/G]ctcaacacctctccttctttcccc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 0.81 | 0.79 | 1.06 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Whole_Blood