rs2418509 chr3:153961586 G>A

Sequence
tgtttactgaaaatacagcacatt[G/A]gacaagggttctaaccttcatagt
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
ASB for transcription factors
SMCA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN -1.44 1.72 1.000.02 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi),  diastolic blood pressure (dbp),  serum creatinine,  systolic blood pressure (sbp),  years of education
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Esophagus_Muscularis,  Pancreas,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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