rs2418902 chr11:32363400 A>G

Sequence
attaggacatggacatctgtggga[A/G]gacattaatctgcctactacaggg
ASB in cell types
D341 Med (medulloblastoma)
ASB for transcription factors
OTX2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OTX2_HUMAN 0.51 1.58 1.003.7·10-3 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  body mass index (bmi),  infant head circumference,  systolic blood pressure (sbp),  waist hip ratio
GTEx eQTL Adipose_Visceral_Omentum,  Esophagus_Muscularis,  Muscle_Skeletal,  Spleen

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