rs2419054 chr1:67850818 C>A
- Sequence
gcagcctgccaggcatgatctaat[C/A]agtgaagcacatgagtcatgagag
- ASB in cell types
- HCT-116 (colon carcinoma) MCF7 (Invasive ductal breast carcinoma) SK-N-SH (neuroblastoma)
- ASB for transcription factors
- NFIB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIB_HUMAN | 3.38 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Breast_Mammary_Tissue, Colon_Transverse, Muscle_Skeletal, Nerve_Tibial, Small_Intestine_Terminal_Ileum, Testis, Thyroid