rs2419615 chr10:112272055 G>T
- Sequence
tggcttaaatatcatttaaagatt[G/T]agtaacttatccacagacacacag
- ASB in cell types
- SUM159PT (Triple negative breast cancer) HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- CEBPB_HUMAN TCF21_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 1.81 | -0.53 | 1.50 | -2.74 | Concordant | |||
| TCF21_HUMAN | 1.42 | n/a | 2.50 | n/a | No Hit |
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Motif analysis
