rs2421812 chr1:171438622 C>T

Sequence
ttagaaaggcaaattttcctgccc[C/T]accccggatctagtgaatcagaaa
ASB in cell types
BEAS-2B (bronchial epithelium)
ASB for transcription factors
GCR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN 0.97 -0.12 0.050.84 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP alzheimers disease,  comorbid depressive syndrome and alcohol dependence,  diastolic blood pressure (dbp),  ldl cholesterol,  systolic blood pressure (sbp),  variant creutzfeldt-jakob disease
GTEx eQTL Artery_Tibial,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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