rs2422095 chr2:75068724 G>A
- Sequence
tacagacttcccttagcataactc[G/A]ggacaccactcacagagactattg
- ASB in cell types
- GM19238 (female B-cells lymphoblastoid cell lines) GM12891 (male B- cells lymphoblastoid cell line) GM18505 (female B-cells Lymphoblastoid Cell Lines) GM18951 (B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.03 | 3.17 | 1.81 | n/a | No Hit | |||
| STAG1_HUMAN | -4.86 | 3.37 | 3.17 | n/a | n/a |
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