rs2422576 chr20:1509506 A>C
- Sequence
caaattaggcagcagaaaaatgtg[A/C]tgcatctgcctcatgggaggctgt
- ASB in cell types
- foreskin keratinocyte GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.50 | 1.22 | 1.63 | n/a | No Hit |
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