rs2423023 chr20:4809797 C>G
- Sequence
gtgggaggagctaggaatgaggtg[C/G]gttcagctggagcccagccacagc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) HEK293 (embryonic kidney)
- ASB for transcription factors
- GLIS1_HUMAN HTF4_HUMAN ARNT_HUMAN IKZF2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GLIS1_HUMAN | 3.58 | n/a | 2.00 | n/a | No Hit | |||
| HTF4_HUMAN | 2.54 | -2.20 | 1.00 | n/a | No Hit | |||
| ARNT_HUMAN | 2.74 | n/a | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.12 | -0.91 | 1.00 | n/a | n/a | |||
| RUNX3_HUMAN | 2.24 | -2.06 | 1.00 | n/a | No Hit |
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