rs2424534 chr20:23398229 G>A
- Sequence
aagtcagtacagcagaaatggaga[G/A]gaaagaatctgatctaccaggaaa
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) MDM(monocyte derived macrophages)
- ASB for transcription factors
- SMCA4_HUMAN FLI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCA4_HUMAN | 0.10 | 1.80 | 1.00 | n/a | n/a | |||
| FLI1_HUMAN | -2.43 | 2.54 | 1.00 | -2.88 | Discordant |
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Motif analysis
