rs2424599 chr20:23668826 T>C
- Sequence
cagagcaatggccagtagatggca[T/C]agcctccttttcctgcagctgtcc
- ASB in cell types
- IPSC-derived bipolar neuron GM12891 (male B- cells lymphoblastoid cell line) bipolar neuron
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.12 | 1.25 | 1.20 | 3.65 | Discordant |
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Motif analysis
