rs2425847 chr20:46279288 A>G

Sequence
caaaaaactcatgactcaggagtc[A/G]gtgtgagagaaatatcagcatgtg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
MNT_HUMAN EMSY_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MNT_HUMAN 2.21 0.02 0.021.00 1.83 n/a No Hit
EMSY_HUMAN 2.22 n/a 0.021.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI self-reported math ability (mtag)
GRASP late onset alzheimers disease,  obesity with early age of onset (age >2),  resistance to kuru in aged women despite likely exposure,  years of education
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic

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