rs2426028 chr20:47911193 G>T
- Sequence
ctacagggagacattcagcaggct[G/T]ggggataggaagctccaggtatgt
- ASB in cell types
- HepG2 (hepatoblastoma) iPS-derived dermal fibroblasts
- ASB for transcription factors
- TBX3_HUMAN ZNF24_HUMAN RARA_HUMAN FOXA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX3_HUMAN | 4.34 | -4.14 | 1.00 | n/a | No Hit | |||
| ZNF24_HUMAN | 3.82 | -4.23 | 1.00 | n/a | No Hit | |||
| RARA_HUMAN | 3.32 | n/a | 1.00 | n/a | No Hit | |||
| FOXA2_HUMAN | 2.26 | -3.48 | 1.50 | n/a | No Hit | |||
| CREB1_HUMAN | 3.08 | -3.42 | 1.00 | n/a | No Hit |
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