rs2426029 chr20:47911358 G>A
- Sequence
ttaccgggctaagtcaaggtgtca[G/A]cagggctggctcctgctggaagca
- ASB in cell types
- HepG2 (hepatoblastoma) iPS-derived dermal fibroblasts
- ASB for transcription factors
- FOXA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | n/a | 1.15 | 1.50 | 4.75 | Concordant |
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Motif analysis
