rs2426312 chr20:51431554 C>T
- Sequence
acgagcacagggtagagaagtgcc[C/T]gcagcctgcctgcaagctgttctg
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- SPI1_HUMAN CDK9_HUMAN ETS1_HUMAN BRD4_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | -0.83 | 2.22 | 1.07 | n/a | No Hit | |||
| CDK9_HUMAN | -1.41 | 2.25 | 1.00 | n/a | n/a | |||
| ETS1_HUMAN | -2.24 | 2.36 | 1.00 | -1.32 | Weak Discordant | |||
| BRD4_HUMAN | -0.91 | 1.55 | 1.00 | n/a | n/a |
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Motif analysis
