rs2426682 chr20:56788401 T>A
- Sequence
acagaaggtgtctgcatgccagcc[T/A]tattctgagttctgaggacaccgc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) 22RV1 (prostate carcinoma) HEE (human epididymis epithelial cells) breast tumor
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN RBM25_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.01 | 0.30 | 2.54 | n/a | No Hit | |||
| ANDR_HUMAN | 2.31 | 0.16 | 2.57 | n/a | No Hit | |||
| RBM25_HUMAN | 1.09 | -1.59 | 1.50 | n/a | n/a | |||
| ESR1_HUMAN | 1.48 | 0.71 | 3.29 | n/a | No Hit | |||
| SIN3A_HUMAN | 2.68 | n/a | 3.00 | n/a | n/a |
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