rs2427062 chr20:61304093 G>T

Sequence
accctcaaggaacccgtgtcctgg[G/T]gcctgggaaggaaaaggccaggca
ASB in cell types
MCF7 (Invasive ductal breast carcinoma) MDA-MB-134 (invasive lobular breast carcinoma)
ASB for transcription factors
ESR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN -0.08 1.39 1.009.3·10-3 2.94 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI coronary artery calcified atherosclerotic plaque (130 hu threshold) in type 2 diabetes

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