rs2427230 chr20:61887179 C>T
- Sequence
gtgatgaggtcaggagcctgaccc[C/T]acctccccagtgctcccaggggag
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) glioblastoma cells
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.59 | 2.21 | 1.40 | n/a | No Hit |
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