rs2427327 chr20:62420532 T>A
- Sequence
caacacacaggcacacacccagag[T/A]tacacacatacaacacatatgtac
- ASB in cell types
- HepG2 (hepatoblastoma) HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| HepG2 (hepatoblastoma) | 0.40 | 0.98 | 1.01 | |||
| HEK293 (embryonic kidney) | 0.02 | 0.64 | 1.99 | |||
| MCF7 (Invasive ductal breast carcinoma) | -1.20 | 2.25 | 1.83 |
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