rs2427403 chr20:62716509 T>C

Sequence
atcatagctcgtggtttcagcgcg[T/C]tagtcccgcctccgtgagtctgtg
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
PAX2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PAX2_HUMAN n/a 3.74 1.007.6·10-5 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  parkinsons disease
GTEx eQTL Esophagus_Muscularis

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