rs2427456 chr20:62956015 C>T
- Sequence
ccaggggttaatggttggccctgc[C/T]gtggggaggggctggagccaggat
- ASB in cell types
- HepG2 (hepatoblastoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| HepG2 (hepatoblastoma) | 0.66 | 0.41 | 1.11 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Colon_Transverse, Lung, Muscle_Skeletal, Stomach, Thyroid, Whole_Blood