rs2427462 chr20:62959697 C>T

Sequence
gtgagcctatgagtgagcgctctg[C/T]ggttaaaagttacaggcgctggcc
ASB in cell types
Kasumi-1 (acute myeloblastic leukemia)
ASB for transcription factors
MTG8_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MTG8_HUMAN -0.87 2.90 1.002.1·10-3 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  hdl cholesterol,  ldl cholesterol
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Tibial,  Colon_Transverse,  Lung,  Muscle_Skeletal,  Stomach,  Thyroid,  Whole_Blood

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