rs242792 chr20:60057665 C>T

Sequence
tttggtggtcgtattaagagatct[C/T]tggtgtaggagcatccttcattct
ASB in cell types
MCF7 (Invasive ductal breast carcinoma) neutrophils from periferal blood
ASB for transcription factors
RAD21_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 2.61 0.74 0.040.27 1.71 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP total cholesterol change with statins,  triglycerides change with statins
GTEx eQTL Adipose_Visceral_Omentum,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Prostate,  Spleen,  Vagina,  Whole_Blood

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