rs2429990 chr17:38591266 C>A
- Sequence
cttgtggggtttctccttccttaa[C/A]atgagccacagtctgtgcccatgg
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- SPI1_HUMAN FLI1_HUMAN ETS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 0.30 | 1.89 | 1.30 | n/a | No Hit | |||
| FLI1_HUMAN | 0.10 | 2.86 | 1.17 | -1.10 | Weak Discordant | |||
| ETS1_HUMAN | -1.48 | 2.04 | 1.00 | n/a | No Hit |
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Motif analysis
