rs2430130 chr1:187871370 C>T
- Sequence
aattatcccccacctagagattac[C/T]tcaaggctgcagttaatttacaac
- ASB in cell types
- D341 Med (medulloblastoma)
- ASB for transcription factors
- OTX2_HUMAN EP300_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| OTX2_HUMAN | -0.06 | 1.37 | 2.00 | -1.23 | Weak Discordant | |||
| EP300_HUMAN | 1.98 | -1.77 | 1.25 | n/a | n/a |
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Motif analysis
