rs2430422 chr2:10447743 G>A
- Sequence
gctcgtctgtaccaaggcgagccc[G/A]ggctctgcgcccctgcacctgctg
- ASB in cell types
- primary B-CLL cells K562 (myelogenous leukemia) GM19239 (male B-cells lymphoblastoid cell line) thyroid gland
- ASB for transcription factors
- BRD4_HUMAN CTCF_HUMAN CDK9_HUMAN TIF1B_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 0.90 | 1.97 | 1.61 | n/a | n/a | |||
| CTCF_HUMAN | 0.44 | 0.85 | 1.10 | n/a | No Hit | |||
| CDK9_HUMAN | 2.05 | -0.68 | 1.00 | n/a | n/a | |||
| TIF1B_HUMAN | 1.72 | -0.71 | 2.00 | n/a | n/a |
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