rs2430466 chr6:107314827 A>G

Sequence
tacagaaccattatctaacacagc[A/G]tattaacaaaagggaaaagaaaag
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN n/a 3.87 1.002.0·10-6 2.00 -0.64 Weak Discordant
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Motif analysis

ANDR_HUMAN Weak Discordant
ANDR_HUMAN pic

Genetic associations

GRASP 2 hour glucose,  body mass index (bmi),  fasting blood glucose,  hdl cholesterol,  microalbuminuria,  years of education
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Muscularis

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