rs2433570 chr11:23098210 C>T
- Sequence
gtgtctggagaaatagtcagtgat[C/T]agctcattcactgaagattaaaac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ATF7_HUMAN MTA2_HUMAN COT1_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF7_HUMAN | -5.10 | 3.21 | 1.50 | 1.87 | Weak Concordant | |||
| MTA2_HUMAN | -2.87 | 1.93 | 1.50 | n/a | n/a | |||
| COT1_HUMAN | n/a | 2.40 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | -0.33 | 1.66 | 1.00 | n/a | n/a |
Items per page:
1 – 4 of 4
Motif analysis
