rs2434264 chr5:158595195 T>G
- Sequence
acaatgacggaatctgcctcttgg[T/G]gttgtcgtgagtattaaatcagtt
- ASB in cell types
- T47D (invasive ductal carcinoma) ZR-75-1 (invasive ductal carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.75 | 2.58 | 1.00 | 0.66 | Weak Concordant |
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Motif analysis
