ADASTRA v6.1.0
Search
Browse
Annotate
Help
Downloads
About
rs243836
chr16:55500324
G
>
A
Sequence
tcttagaattgtggctggtgagcc[G/A]cacagactcacagaaacgtgaatc
ASB in cell types
EA.hy 926 (human umbilical vein endothelial cell line)
ASB for transcription factors
HIF1A_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HIF1A_HUMAN
2.48
-0.34
9.9·10
-3
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
rheumatoid arthritis
,
total cholesterol
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Brain_Cortex
,
Brain_Frontal_Cortex_BA9
,
Breast_Mammary_Tissue
,
Nerve_Tibial
,
Pituitary
,
Prostate
,
Skin_Sun_Exposed_Lower_leg
,
Whole_Blood
Download
Download page in JSON
Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)