rs244891 chr5:168472480 G>C

Sequence
ctgtttcacggtggcgttaccaca[G/C]cacaccacatgaggccctaattgt
ASB in cell types
foreskin keratinocyte GBM39 (Human brain tumor)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte -4.22 1.28 1.000.02 2.50
GBM39 (Human brain tumor) 1.79 0.02 0.041.00 2.00
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP birth weight triglycerides change with statins
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Aorta Artery_Coronary Artery_Tibial Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Liver Lung Muscle_Skeletal Nerve_Tibial Ovary Pancreas Prostate Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Spleen Stomach Testis Thyroid Uterus Vagina

Download