rs2455079 chr1:42325230 T>A
- Sequence
ccaggtcatctacctcagtaacaa[T/A]tgctcattagatgaggaaattcct
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- SOX5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SOX5_HUMAN | 2.63 | -2.25 | 1.00 | -1.61 | Weak Concordant |
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Motif analysis
