rs245596 chr5:162683484 A>T
- Sequence
caacctctacaattagtttcgtag[A/T]gccaagaagaaagttccccttttg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN COT1_HUMAN NFAC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.41 | -2.39 | 1.25 | n/a | n/a | |||
| IKZF2_HUMAN | 2.43 | -2.15 | 1.00 | n/a | n/a | |||
| COT1_HUMAN | 1.79 | -1.53 | 1.00 | n/a | No Hit | |||
| NFAC3_HUMAN | 2.36 | -2.38 | 1.00 | n/a | No Hit | |||
| ZN217_HUMAN | 2.51 | -2.35 | 1.00 | n/a | n/a |
Items per page:
1 – 5 of 6