rs245857 chr7:29124008 T>G
- Sequence
actatctgagtcatggtttcccat[T/G]caggtgaattaaagcaccgacata
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | n/a | 3.12 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP hdl cholesterol, lp-pla2 activity, rheumatoid arthritis, sporadic amyotrophic lateral sclerosis (als) survival, sporadic creutzfeldt-jakob disease, total cholesterol, triglycerides
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Left_Ventricle, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Thyroid, Whole_Blood