ADASTRA v6.1.0
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rs246902
chr5:103253553
G
>
A
Sequence
gtcttcagagaatcatgaaatatt[G/A]tgacatcacattgtaattgcataa
ASB in cell types
MSC (mesenchymal stem cells)
ASB for transcription factors
CEBPB_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPB_HUMAN
1.94
0.11
5.1·10
-3
0.95
1.31
-1.27
Weak Concordant
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5
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Motif analysis
CEBPB_HUMAN
Weak Concordant
Show reverse complement
Show rev. comp.
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Genetic associations
GRASP
2 hour glucose
,
childhood acute lymphoblastic leukemia relapse
,
height
,
ldl cholesterol
,
lineage and molecular subtypes in patients with childhood acute lymphoblastic leukemia relapse
,
rheumatoid arthritis
,
years of education
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Adrenal_Gland
,
Artery_Aorta
,
Artery_Coronary
,
Artery_Tibial
,
Brain_Caudate_basal_ganglia
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Brain_Cortex
,
Brain_Frontal_Cortex_BA9
,
Brain_Nucleus_accumbens_basal_ganglia
,
Brain_Putamen_basal_ganglia
,
Brain_Spinal_cord_cervical_c-1
,
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Cells_EBV-transformed_lymphocytes
,
Colon_Sigmoid
,
Colon_Transverse
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Lung
,
Minor_Salivary_Gland
,
Muscle_Skeletal
,
Nerve_Tibial
,
Ovary
,
Pituitary
,
Prostate
,
Skin_Sun_Exposed_Lower_leg
,
Small_Intestine_Terminal_Ileum
,
Spleen
,
Stomach
,
Thyroid
,
Vagina
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)
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